[overture] Re: Installing Overture.v24 on Mac OSX Lion
- From: "J. P. Bernstein" <astro@xxxxxxx>
- To: overture@xxxxxxxxxxxxx
- Date: Mon, 5 Mar 2012 16:37:09 -0600
Thanks, Kyle.
That worked. After several fixes for library location issues, make concluded
without errors (is there supposed to be a "success" message)? I will send an
email to the list recounting each step that I had to do to build Overture on
Mac OSX Lion once I am able to run the tests (see below).
When I tried to run check.p, I got:
[alcfwl150:local/ztar/Overture.v24] root# ./check.p
unable to open /usr/local/Overture.v24/configure.options. Check your Overture
env variable.
1 at ./check.p line 30.
The file in question is, indeed, missing from $Overture. Has it been
superseded, or something?
Best,
Joe
On Mar 5, 2012, at 12:48 PM, Kyle K. Chand wrote:
> Hi Joe,
>
> I have two fixes for this, one is nice and cryptic. I can't remember what
> exactly is broken about the configure (I thought it was fixed) but the
> configure script think you are using a build of Mesa rather than a
> distribution on the system or Macports (hence the relative directory
> references in the include file). What is your OpenGL set to?
>
> fix 1: Change $Overture/include/OvertureDefines.h so that the OV_USE_MESA
> variable is set to:
> #define OV_USE_MESA 2
> Note you will need to manually change this every time you do a configure
>
> fix 2: Build your own copy of the Mesa libraries somewhere and set your
> OpenGL environment variable accordingly. The nice thing about this fix is
> that you will get offscreen rendering for hardcopies (and no worries upon
> re-running configure).
>
> Regards,
> Kyle
>
> mailto: chand1@xxxxxxxx
> phoneto: (925) 422 7740
>
>
>
> On Mar 5, 2012, at 9:31 AM, J. P. Bernstein wrote:
>
>> Hello Kyle,
>>
>> The command you suggested did not work (see below). I was able to work
>> around the issue by doing "sudo tcsh" to open a root shell and making a
>> symbolic line to the Mesa lib (again, see below).
>>
>> The make ran for some time and then failed with:
>>
>> --------------------
>> osRender.C:215:45: error: GL/../../src/mesa/main/context.h: No such file or
>> directory
>> osRender.C:230: error: 'GLcontext' does not name a type
>> osRender.C:231: error: ISO C++ forbids declaration of 'GLvisual' with no type
>> osRender.C:231: error: expected ';' before '*' token
>> osRender.C:232: error: ISO C++ forbids declaration of 'GLframebuffer' with
>> no type
>> osRender.C:232: error: expected ';' before '*' token
>> osRender.C:241: error: ISO C++ forbids declaration of 'GLchan' with no type
>> osRender.C:241: error: expected ';' before '*' token
>> osRender.C: In member function 'int
>> GL_GraphicsInterface::offScreenRenderMesa(const char*, GraphicsParameters&)':
>> osRender.C:299: error: 'GLcontext' was not declared in this scope
>> osRender.C:299: error: 'CC' was not declared in this scope
>> osRender.C:299: error: expected primary-expression before ')' token
>> osRender.C:299: error: expected `;' before 'OSMesaGetCurrentContext'
>> osRender.C:313: error: 'oldCC' was not declared in this scope
>> osRender.C:313: error: expected primary-expression before ')' token
>> osRender.C:313: error: 'struct osmesa_context' has no member named 'gl_ctx'
>> osRender.C:314: error: 'struct osmesa_context' has no member named 'gl_ctx'
>> osRender.C:314: error: expected primary-expression before ')' token
>> osRender.C:314: error: expected `;' before 'CC'
>> osRender.C:322: error: expected primary-expression before ')' token
>> osRender.C:322: error: 'struct osmesa_context' has no member named 'gl_ctx'
>> osRender.C:322: error: '_mesa_copy_context' was not declared in this scope
>> osRender.C:359: error: 'struct osmesa_context' has no member named 'gl_ctx'
>> osRender.C:359: error: expected primary-expression before ')' token
>> osRender.C:359: error: expected `)' before 'oldCC'
>> make[1]: *** [osRender.o] Error 1
>> make: *** [all] Error 2
>> --------------------
>>
>> Any thoughts?
>>
>> Best,
>>
>> Joe
>>
>>
>> ++++++++++sudo and source issue++++++++++
>> sudo "source defenv; ./configure darwin useHDF5 FC=gfortran"
>>
>> resulted in:
>>
>> --------------------
>> usage: sudo -h | -K | -k | -L | -V
>> usage: sudo -v [-AknS] [-g groupname|#gid] [-p prompt] [-u user name|#uid]
>> usage: sudo -l[l] [-AknS] [-g groupname|#gid] [-p prompt] [-U user name] [-u
>> user
>> name|#uid] [-g groupname|#gid] [command]
>> usage: sudo [-AbEHknPS] [-C fd] [-g groupname|#gid] [-p prompt] [-u user
>> name|#uid]
>> [-g groupname|#gid] [VAR=value] [-i|-s] [<command>]
>> usage: sudo -e [-AknS] [-C fd] [-g groupname|#gid] [-p prompt] [-u user
>> name|#uid]
>> file ...
>> --------------------
>>
>> So I tried this:
>>
>> --------------------
>> alcfwl150:Overture.v24 jpbernst$ sudo source defenv; sudo ./configure darwin
>> useHDF5 FC=gfortran
>> Password:
>> sudo: source: command not found
>> *** configure for machine = darwin ****
>> *** machineType = [x86_64] ****
>> First checking for proper definition of Overture environmental variables:
>> ERROR: environmental variable APlusPlus = DOES NOT EXIST
>> ERROR: environmental variable OpenGL = DOES NOT EXIST
>> ERROR: environmental variable HDF = DOES NOT EXIST
>> ERROR: environmental variable Overture = DOES NOT EXIST
>> ERROR: environmental variable XLIBS = DOES NOT EXIST
>> ERROR: Unable to find OpenGL library libGL or libMesaGL in /lib64
>> Check the OpenGL environmental variable and try again
>> INFO: I am going to copy my version of the GLw files into Overture/static
>> directory
>> Checking for the Motif header files in /include/Xm/
>> Unable to find the Motif or Lesstif file /include/Xm/Xm.h
>> Check your MOTIF environmental variable, MOTIF=[]. It seems to be incorrect.
>> --------------------
>>
>> I then tried the following, which worked, as far as the env vars are
>> concerned, but uncovered a Mesa location issue:
>>
>> --------------------
>> alcfwl150:Overture.v24 jpbernst$ sudo tcsh
>> [alcfwl150:/usr/local/Overture.v24] root# source defenv
>> [alcfwl150:/usr/local/Overture.v24] root# ./configure darwin useHDF5
>> FC=gfortran
>> *** configure for machine = darwin ****
>> *** machineType = [x86_64] ****
>> First checking for proper definition of Overture environmental variables:
>> APlusPlus = /usr/local/A++P++-0.8.0/A++/install
>> OpenGL = /opt/local
>> HDF = /opt/local
>> Overture = /usr/local/Overture.v24
>> XLIBS = /opt/local
>> ERROR: Unable to find OpenGL library libGL or libMesaGL in /opt/local/lib64
>> --------------------
>>
>> I devised the following fix:
>>
>> --------------------
>> [alcfwl150:/usr/local/Overture.v24] root# mkdir /opt/local/lib64
>> [alcfwl150:/usr/local/Overture.v24] root# ln -s
>> /opt/local/lib/libOSMesa.7.dylib /opt/local/lib64/libMesaGL.dylib
>> [alcfwl150:/usr/local/Overture.v24] root# ./configure darwin useHDF5
>> FC=gfortran *** configure for machine = darwin ****
>> *** machineType = [x86_64] ****
>> First checking for proper definition of Overture environmental variables:
>> APlusPlus = /usr/local/A++P++-0.8.0/A++/install
>> OpenGL = /opt/local
>> HDF = /opt/local
>> Overture = /usr/local/Overture.v24
>> XLIBS = /opt/local
>> Using Mesa `OpenGL' libraries since libMesaGL found in /opt/local/lib64
>> Mesa has GLwDrawA.h in the include dir
>> INFO: I am going to copy my version of the GLw files into Overture/static
>> directory
>> Checking for the Motif header files in /opt/local/include/Xm/
>> Using motif.
>> perlloc = [/opt/local/lib/perl5/5.12.3/darwin-multi-2level/CORE]
>> Using perl headers and lib from
>> perllibs=[/opt/local/lib/perl5/5.12.3/darwin-multi-2level/CORE]
>> Will link to the libraries perllibs=[-lperl -ldl -lm -lutil -lc]
>> Using configuration file config/MakeDefs.darwin
>> Using hdf 5
>> Using Compilers: C++=g++, C=gcc, Fortran=gfortran (base version: C++=g++,
>> C=gcc, Fortran=gfortran)
>> Using g++ version g++ (GCC) 4.3.6
>> gcc lib directory = /opt/local/lib64
>> **Overture will be compiled in double precision
>> debugging turned on, using debugFlag=-g.
>> Checking for bool support
>> bool is supported.
>> Checking for exceptions support
>> exceptions are supported.
>> Checking for STL availability. $STLINC=
>> stl is available using std include format
>> the compiler understands namespaces
>>
>> the compiler understands default template arguments
>>
>> the compiler understands explicit
>> Create the Makefile for directory: mapUtil
>> Create the Makefile for directory: phoneyFiles
>> Create the Makefile for directory: Cad
>> Create the Makefile for directory: DataBase
>> Create the Makefile for directory: Grid
>> Create the Makefile for directory: GridFunction
>> Create the Makefile for directory: GridGenerator
>> Create the Makefile for directory: Mapping
>> Create the Makefile for directory: Oges
>> Create the Makefile for directory: Ogshow
>> Create the Makefile for directory: otherStuff
>> Create the Makefile for directory: bin
>> Create the Makefile for directory: boxlib
>> Create the Makefile for directory: lib
>> Create the Makefile for directory: primer
>> Create the Makefile for directory: sampleGrids
>> Create the Makefile for directory: static
>> Create the Makefile for directory: templates
>> Create the Makefile for directory: examples
>> Create the Makefile for directory: Ogmg
>> Create the Makefile for directory: tests
>>
>> configuration options written to file configure.options
>>
>> Make options saved to file make.options.
>>
>> Build the Makefile in the main directory
>> done configuration.
>>
>> ****************************************************************************************************
>> WARNING: Environment variable LANG=en_US.UTF-8 -- Overture may not work with
>> this language.
>> European languages may reverse the meaning of `.' and ',' in numbers
>> such a 3,14 or 3.14
>> and then Overture will not parse command files properly.
>> Type `locale' to see your language settings. You may need to change
>> to the language `en_US'
>> ****************************************************************************************************
>> type `make' to build Overture (or 'make -j2' for a parallel make with 2
>> processes).
>> type `make rapsodi' to build the Rapsodi libraries and rap.
>> --------------------
>>
>> On Mar 2, 2012, at 5:02 PM, Kyle K. Chand wrote:
>>
>>> Joe,
>>>
>>> The sudo might be breaking it as it probably starts a new shell. You can
>>> try this:
>>> sudo "source defenv; ./configure darwin useHDF5 FC=gfortran"
>>> Note that you will then have to do
>>> sudo "source defenv; make"
>>> to actually build it, assuming this works. This will not work if the
>>> default shell for root is something other than csh. For example, if it is
>>> bash then you will need to
>>> write a bash version of defenv that you can execute in the sudo command.
>>>
>>> Or login as root and do the install if you need it to have root ownership.
>>>
>>> regards,
>>> Kyle
>>>
>>> mailto: chand1@xxxxxxxx
>>> phoneto: (925) 422 7740
>>>
>>>
>>>
>>> On Mar 2, 2012, at 2:28 PM, J. P. Bernstein wrote:
>>>
>>>> Thanks, Kyle. That worked with:
>>>>
>>>> sudo ./configure --with-CC="/opt/local/bin/gcc -I/usr/include/malloc"
>>>> --with-CXX="/opt/local/bin/g++ -I/usr/include/malloc" --prefix=`pwd`
>>>>
>>>> Moving on to the next step, the enviers set in defenv are not being
>>>> inherited when trying to build Overture. I have the following set:
>>>>
>>>> % cat defenv
>>>> #! /bin/csh -f
>>>> #
>>>> # Define environment variables for Overture
>>>> #
>>>> # see the install notes on the web for further explanation or
>>>> Overture/doc/install.tex
>>>> #
>>>> # edit this file and change as appropriate for your system,
>>>> # then type 'source defenv'
>>>>
>>>> # You will need to change the following:
>>>> setenv XLIBS /opt/local
>>>> setenv MOTIF /opt/local
>>>> setenv OpenGL /opt/local
>>>> setenv HDF /opt/local
>>>> setenv APlusPlus /usr/local/A++P++-0.8.0/A++/install
>>>> setenv Overture /usr/local/Overture.v24
>>>>
>>>>
>>>> but get:
>>>>
>>>> % sudo ./configure darwin useHDF5 FC=gfortran
>>>> Password:
>>>> *** configure for machine = darwin ****
>>>> *** machineType = [x86_64] ****
>>>> First checking for proper definition of Overture environmental variables:
>>>> ERROR: environmental variable APlusPlus = DOES NOT EXIST
>>>> ERROR: environmental variable OpenGL = DOES NOT EXIST
>>>> ERROR: environmental variable HDF = DOES NOT EXIST
>>>> ERROR: environmental variable Overture = DOES NOT EXIST
>>>> ERROR: environmental variable XLIBS = DOES NOT EXIST
>>>> ERROR: Unable to find OpenGL library libGL or libMesaGL in /lib64
>>>> Check the OpenGL environmental variable and try again
>>>> INFO: I am going to copy my version of the GLw files into Overture/static
>>>> directory
>>>> Checking for the Motif header files in /include/Xm/
>>>> Unable to find the Motif or Lesstif file /include/Xm/Xm.h
>>>> Check your MOTIF environmental variable, MOTIF=[]. It seems to be
>>>> incorrect.
>>>>
>>>> Any thoughts?
>>>>
>>>> Sorry for the basic questions; while I am very experienced with linux, I
>>>> am rather new to mac.
>>>>
>>>> Best,
>>>>
>>>> Joe
>>>>
>>>>
>>>> On Mar 1, 2012, at 4:52 PM, Kyle K. Chand wrote:
>>>>
>>>>> Joe,
>>>>>
>>>>> Below are some more recent instructions for a parallel build of Overture
>>>>> on a Mac, including an A++P++ configure line which does not include
>>>>> -mlongcall (that was for older PowerPC macs, I believe).
>>>>> For a serial build, the A++ configure line I currently use (on a OS X
>>>>> 10.5.8 machine) is:
>>>>> % ./configure --with-CC="/Users/chand1/MacPorts/bin/gcc
>>>>> -I/usr/include/malloc" --with-CXX="/Users/chand1/MacPorts/bin/g++
>>>>> -I/usr/include/malloc"
>>>>> --prefix="/Users/chand1/Overture/A++P++/A++P++-0.7.9d/gcc4.3.3"
>>>>> Note, my MacPorts is not installed in /opt/local, you will need to adjust
>>>>> the configure line appropriately.
>>>>>
>>>>> For Overture, one would use
>>>>> % configure darwin useHDF5 FC=gfortran
>>>>> or something similar.
>>>>>
>>>>> Regards,
>>>>> Kyle
>>>>>
>>>>>
>>>>> mailto: chand1@xxxxxxxx
>>>>> phoneto: (925) 422 7740
>>>>>
>>>>>
>>>>>
>>>>> Begin forwarded message:
>>>>>
>>>>>> From: Kyle K.Chand <chand1@xxxxxxxx>
>>>>>> Date: September 24, 2010 3:44:20 PM PDT
>>>>>> To: Ramesh Balakrishnan <bramesh@xxxxxxxxxxxx>
>>>>>> Cc: "overture@xxxxxxxxxxxxx" <overture@xxxxxxxxxxxxx>
>>>>>> Subject: [overture] Parallel Overture on Mac
>>>>>> Reply-To: "overture@xxxxxxxxxxxxx" <overture@xxxxxxxxxxxxx>
>>>>>>
>>>>>> Hi Ramesh,
>>>>>>
>>>>>> I managed to build Overture on the Mac. There were a few odd things.
>>>>>>
>>>>>> 0) It appears that openmpi is on the mac by default in /usr, I had not
>>>>>> known that.
>>>>>> You can also use the openmpi and mpich or lam mpi from macports.
>>>>>>
>>>>>> 1) the configure line for A++P++ is:
>>>>>>
>>>>>> ./configure --prefix=`pwd` --without-PADRE --disable-shared --disable-
>>>>>> mpirun-check --enable-PXX --with-CC="gcc -I/usr/include/malloc" --with-
>>>>>> CXX="g++ -I/usr/include/malloc" --with-mpi-libs="-lmpi_cxx -lmpi"
>>>>>>
>>>>>> 2) To build A++P++, use :
>>>>>> make MAKE=make install
>>>>>>
>>>>>> 3) make sure you have a parallel build of HDF5
>>>>>>
>>>>>>
>>>>>> 4) configure Overture using something like:
>>>>>> ./configure darwin parallel useHDF5 FC=gfortran
>>>>>>
>>>>>> 5) Now you need to fix the PFLAGS variable in $Overture/GridFunction/
>>>>>> Makefile in order to add -I/usr/include/malloc
>>>>>>
>>>>>> 6) In the primer directory Makefile, eliminate the -Wl-weak-
>>>>>> framework,VecLib option from all the make variables
>>>>>>
>>>>>> 7) Fix ParallelUtility.C, the bool version of broadCast should be:
>>>>>> void
>>>>>> broadCast( bool & value, const int & fromProcessor )
>>>>>> {
>>>>>> #ifdef USE_PPP
>>>>>> if( Communication_Manager::Number_Of_Processors==0 )
>>>>>> return;
>>>>>>
>>>>>> int tmpValue = value;
>>>>>> MPI_Bcast( &tmpValue, 1, MPI_INT, fromProcessor, MPI_COMM_WORLD);
>>>>>> value = tmpValue;
>>>>>>
>>>>>> #endif
>>>>>> }
>>>>>>
>>>>>> 8) Now you should be able to build Overture and also build the
>>>>>> examples primer/pppWave and primer/pwave
>>>>>>
>>>>>> I was able to build and run pppWave and pwave with two MPI tasks on my
>>>>>> mac laptop. We are working the fixes
>>>>>> into the next release.
>>>>>>
>>>>>> Let me know how this works!
>>>>>> Kyle
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> mailto: chand1@xxxxxxxx
>>>>>> phoneto: (925) 422 7740
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>
>>>>
>>>
>>>
>>
>>
>
>
Other related posts:
