[mira_talk] Re: duplicate read names not allowed ?

  • From: Bastien Chevreux <bach@xxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Mon, 17 Sep 2012 22:06:18 +0200

On Sep 17, 2012, at 20:57 , Laurent MANCHON wrote:
>> I suspect your files do not adhere to the above :-)
> you are right, this is what i have:
> [...]
> it seems to be a Casava 1.8 format but pair member is missing

Well, renaming the reads to have /1 and /2 will do the trick. a sed one-line 
should be able to take care of that.

B.

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