[mira_talk] Re: MIRA: I am doing it wrong.

  • From: Alessandro Riccombeni <rikkomba@xxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Tue, 22 Dec 2009 16:01:22 +0000

Hi,

I have sff_extract 0.2.6


On Tue, Dec 22, 2009 at 3:55 PM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote:

> On Dienstag 22 Dezember 2009 Alessandro Riccombeni wrote:
> > I am trying to use sff_extract with the titanium linker sequences.I put
> >  both the titanium sequence and its reverse complement in the
> linker.fasta
> >  file, but sff_extract says:
> >
> > sequence 'titlinker2' present multiple times. Aborting.
> > How do I use sff_extract with two sequences? I don't get an error for the
> > first sequence.
>
> Which version of sff_extract is that? The one I gave in the download
>
>  http://www.chevreux.org/tmp/mira_3rdparty_10-12-2009.tar.bz2
>
> or an earlier version? Those had problems which I fixed at some point in
> time,
> the version contained in the package above *should* work (at least it did
> for
> me).
>
> Regards,
>  Bastien
>
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