[mira_talk] Re: Question about turn off end clip.
- From: "Yi Zheng" <yz357@xxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Tue, 22 Dec 2009 11:36:56 -0500 (EST)
Hi Bastien and Laurent,
Thanks for your help.
Yi
> On Donnerstag 17 Dezember 2009 Yi Zheng wrote:
>> I write a simple script to handle this problem. It will delete ESTs that
>> were clipped too much ends from assembly result.
>
> It's not the end clips (-CL:pec=no switches that off), it's the chimera
> recognition routines.
>
>> But I have a old version
>> of 2.9.43 do not have this problem. It will not trim ends of reads when
>> turn off end cliping function. So I think 2.9.43 is more fit for my
>> assembly project.
>
> I don't think so, but the final call is up to you:
> http://www.chevreux.org/tmp/mira_2.9.43_dev_linux-gnu_i686_32.tar.bz2
>
> Please note that I will not support this version (or questions to it) as
> it
> dates from almost the start of this year and development has moved forward
> quite a lot.
>
> B.
>
>
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