got it working now - although i had installed blas and lapack from a repository i guess they must have been compiled with an older version of the compiler i have at the moment, so i download the latest as a tar.gz and installed that. thanks all for the help On 24 April 2012 00:43, Bill Henshaw <henshaw@xxxxxxxx> wrote: > Hi David, > 1. If the other Overture tests from check.p work then I would not worry > about the error below for asmo.cmd > > 2. The function "_gfortran_transfer_real_write" should supposedly be in > the gfortran library. If the Overture programs > linked ok then they must have found this function then. One > difference with cg is that it links to the lapack and blas > libraries. Did you compile and install lapack and blas with the > same version of gfortran as you used for Overture? > > 3. You might also want to look at the Ubuntu install instructions from > Mohammed: > > http://mabouali.wordpress.com/2012/01/16/installing-overture-on-a-freshly-installed-ubuntu/ > > Regards, > Bill > > > On 04/23/2012 05:36 AM, David Sinden wrote: > > sorry, should have included the line which breaks down, as it contains > the linking of the source files etc > > g++ -fPIC -g -w -I/home/dave/Code/Overture/cg.v24/common/src > -I/home/dave/Code/Overture/cg.v24/common/shared > -I/home/dave/Code/Overture/cg.v24/common/moving/src > -I/home/dave/Code/Overture/cg.v24/common/multiComponent/src > -I/home/dave/Code/Overture/cg.v24/common/chemistry > -I/home/dave/Code/Overture/cg.v24/common/dataBase > -I/home/dave/Code/Overture/cg.v24/src > -I/home/dave/Code/Overture/Overture.v24/include > -I/home/dave/Code/Overture/A++P++-0.8.0/A++/install/include > -I/home/dave/Code/Overture/hdf5-1.6.5/include > -I/home/dave/Code/Overture/Mesa-7.5.1/include -o > /home/dave/Code/Overture/cg.v24/common/bin/checkCheckFiles > /home/dave/Code/Overture/cg.v24/common/obj/checkCheckFiles.o > -Wl,-rpath,/home/dave/Code/Overture/Overture.v24/lib > -L/home/dave/Code/Overture/Overture.v24/lib -lOverture -lOverture_static > -Wl,-rpath,/home/dave/Code/Overture/hdf5-1.6.5/lib > -L/home/dave/Code/Overture/hdf5-1.6.5/lib -lhdf5 -ljpeg -lz > -Wl,-rpath,/home/dave/Code/Overture/A++P++-0.8.0/A++/install/lib > -L/home/dave/Code/Overture/A++P++-0.8.0/A++/install/lib -lApp -lApp_static > -Wl,-rpath,/usr -L/usr -llapack -lblas -lgfortran > -Wl,-rpath,/home/dave/Code/Overture/Mesa-7.5.1/lib > -L/home/dave/Code/Overture/Mesa-7.5.1/lib -lGL -lGLU -lOSMesa > -Wl,-rpath,/usr/lib -L/usr/lib -lXm -L/usr/lib -lXpm -lXp -lXt -lXmu -lXi > -lXext -lX11 -Wl,-rpath,/usr/lib/perl/5.12/CORE -L/usr/lib/perl/5.12/CORE > -lperl -ldl -lm -lpthread -lc -lcrypt > > > On 23 April 2012 13:26, David Sinden <david.sinden@xxxxxxxxx> wrote: > >> i have installed overture and it seems to work, at least the checks, >> tests and examples all work, with one exception >> >> Running: /home/dave/Code/Overture/Overture.v24/bin/ogen noplot nopause >> abortOnEnd /home/dave/Code/Overture/Overture.v24/sampleGrids/asmo.cmd > >> gridsFromCad.out... >> Segmentation fault >> ERROR running /home/dave/Code/Overture/Overture.v24/bin/ogen noplot >> nopause abortOnEnd >> /home/dave/Code/Overture/Overture.v24/sampleGrids/asmo.cmd > >> gridsFromCad.out. Check the logfile gridsFromCad.out >> >> >> XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX >> ERROR return rt=256 >> >> the log file shows that there is no not sure how significant this is or >> what it indicates, but something is wrong as i can't make any of the files >> from cg as i get errors for a whole host of other undefined references such >> as >> >> /home/dave/Code/Overture/Overture.v24/lib/libOverture.so: undefined >> reference to `_gfortran_transfer_real_write' >> collect2: ld returned 1 exit status >> make[1]: *** [/home/dave/Code/Overture/cg.v24/common/bin/checkCheckFiles] >> Error 1 >> make[1]: Leaving directory `/home/dave/Code/Overture/cg.v24/common' >> make: *** [libCommon] Error 2 >> >> is this a problem from the compilation of overture or a problem in the >> linking of cg with overture? as cg uses the make.options settings from >> overture i doubt it. i have copied over the defenv file from overture and >> load that before compiling so that the environmental variables are the >> same, but could this be a problem. my set up is >> >> hdf5-1.6.5, >> mesa-7.5.1 >> perl (v5.12.4) >> gcc version 4.6.1 (Ubuntu/Linaro 4.6.1-9ubuntu3) >> >> and i call the hdf5 and mesa directories directly. it looks similar to >> the error reported here: //www.freelists.org/post/overture/cg-error >> >> thanks, david >> >> > >