[mira_talk] convert_project Error
- From: Robert Trygve Good <rtgood@xxxxxxxxxxxxxx>
- To: "mira_talk@xxxxxxxxxxxxx" <mira_talk@xxxxxxxxxxxxx>
- Date: Tue, 30 Oct 2012 02:44:31 +0000
I'm using for the first time mira3.9.5 .
After assembly for viewing in Tablet I used:
convert_project -f maf -t ace Gecardoidea_natalis_out.maf
Gecardoidea_natalis_out.ace
Same error with -f caf instead of -f maf but -t sam works
gave
Generated 9 unique template ids for 9 valid reads.
Error while dumping Gecardoidea_natalis_rep_c184.
Internal logic/programming/debugging error (*sigh* this should not have
happened).
Please file a bug report on http://sourceforge.net/apps/trac/mira-assembler/
"Read does not cover given contigposition"
->Thrown: char Contig::getQualityInRead(int32 contigposition, int32 readindex)
->Caught: void dumpContigs(list<Contig> & clist, ostream & fout)
Aborting process, probably due to an internal error.
Fedora 17 on a sun x2200
Rob Good
rtgood@xxxxxxxxxxxxxx
Department of Genetics
Royal Pde
University of Melbourne
3010
+61383442347
0434058250
--
You have received this mail because you are subscribed to the mira_talk mailing
list. For information on how to subscribe or unsubscribe, please visit
http://www.chevreux.org/mira_mailinglists.html
Other related posts:
