[mira_talk] Manifest file input error

  • From: "Jackie Lighten" <jackie.lighten@xxxxxx>
  • To: <mira_talk@xxxxxxxxxxxxx>
  • Date: Mon, 29 Oct 2012 11:21:31 -0300

Hi,

 

This is my first time using a manifest file, and trying Mira 3.9.5.

I get the following error when using the manifest file format below :

"Fatal error (may be due to problems of the input data or parameters):

 

"Some errors occured during loading phase, please check the log."

 

->Thrown: bool Assembly::globWalkPath(const string & dn,
list<string>&filenames, list<string>&filetypes)

->Caught: main

 

Aborting process, probably due to error in the input data or
parametrisation."

 

 

Manifest format:

"

project = winterANDacadian 

job = denovo,est,accurate

parameters =     -GE:number_of_threads=4 \

                                454_SETTINGS \

                                -CL:qc=no:cpat=1 \

                                

 

readgroup=winterANDacadian

data=winterANDacadian_in.454.fasta winterANDacadian_in.454.fasta.qual

technology=454

 

"

 

Any ideas what I am doing wrong?

 

Best,

 

J

 

 

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