[mira_talk] Re: Could not create new snapshot directory? Disk full? changed permissions?
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Thu, 25 Oct 2012 21:18:01 +0200
On Oct 24, 2012, at 10:01 , Dimitar Kenanov <dimitar@xxxxxxxxxxxxxx> wrote:
> Btw, i think ive read before that MIRA uses around 1.5Gb RAM per million of
> Illumina reads. I have 2 questions regarding this:
> 1. Is it still so?
Uh, I'd need to check. It obviously also depends on the read length, but for
100bp in 3.4.x I think it's a good estimate, in 3.9 I reduced this (not by
much, but still).
> 2. Is this 1.5Gb per million single reads? I mean that for paired-end it will
> be 3GB.
It is always per read, not per pair, triplet or whatever the sequencing
industry may still invent :-)
B.
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