[mira_talk] Re: problem with miraSearchESTSNPs
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Sat, 23 Apr 2011 18:06:24 +0200
On Apr 23, 2011, at 17:59 , Jackie wrote:
> Thanks for the quick reply. Feel stupid now!
> So I changed my code, yet now get errors associated with “esps1”
>
> Parsing parameters: --project=skt --job=denovo,est,normal,454
> 454_SETTINGS,esps1
You placed "esps1" at the wrong place, it needs to be in the "--job" section.
Please have a look at
http://mira-assembler.sourceforge.net/docs/DefinitiveGuideToMIRA.html#sect2_mirasearchestsnps
where the example shows you how to do it:
bach@arcadia:$ miraSearchESTSNPs
--project=msd
--job=denovo,normal,sanger,esps1
>&log_assembly_esps1.txt
Bastien
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