On Montag 13 Dezember 2010 Cleo Ho wrote: > I had the same problem before, and it turned out I didn't put ssaha2 in the > correct directory. ssaha2 should be put in place where mira can call it > directly by the its command line from any directory. Such directory may be > usr/local/bin, for example, in a Linux system. Hope this helps. Ooops ... I thought that this was covered by sff_extract checking for SSAHA2 ... but I think I might have de-activated the check when I git reports that it misfired. Hmmm, have to rethink it. Thanks for that input, helped a lot as it seems :-) B. -- You have received this mail because you are subscribed to the mira_talk mailing list. For information on how to subscribe or unsubscribe, please visit http://www.chevreux.org/mira_mailinglists.html