[mira_talk] Re: Problems using sff extract
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Tue, 14 Dec 2010 09:47:44 +0100
On Dienstag 14 Dezember 2010 Ganga Jeena wrote:
> [dc103@hpc orig_data]$ /usr/local/bin/sff_extract -o cp_454 -a -l
> flx_linker.fa -i "insert_size:8000, insert_stdev:1000"
> /home/dc103/CP_Data/sff_lf/GSMQLLJ01.sff
> [Errno 22] Invalid argument
>
No, not
/usr/local/bin/sff_extract
but
/usr/local/bin/ssaha2
While we are at it: what does
which ssaha2
say?
B.
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