[mira_talk] Re: Mira and NFS mount

  • From: Bastien Chevreux <bach@xxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Tue, 9 Aug 2011 22:35:35 +0200

On Tuesday 09 August 2011 21:38:12 Iddo Friedberg wrote:
> Thanks Bastien.
> 
> Anyhow, it seems like I may have found a cluster with some local diskspace,
> so I can redirect the log directory locally. Also installed 3.4rc4. The
> only trouble is, that now I an getting the following:
> 
> mira --project=CCGTCC COMMON_SETTINGS
> -DI:lrt=/localscratch/friedbi/mira_logs --job=denovo,genome,accurate,solexa
> SOLEXA_SETTINGS -GE:tismin=300:tismax=500 >& log_assembly.txt


-DI:lrt got renamed to -DI:trt.

One of the few incompatibilities in command line parsing I had to introduce 
lately, sorry for that.

B.

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