On Tuesday 09 August 2011 21:38:12 Iddo Friedberg wrote: > Thanks Bastien. > > Anyhow, it seems like I may have found a cluster with some local diskspace, > so I can redirect the log directory locally. Also installed 3.4rc4. The > only trouble is, that now I an getting the following: > > mira --project=CCGTCC COMMON_SETTINGS > -DI:lrt=/localscratch/friedbi/mira_logs --job=denovo,genome,accurate,solexa > SOLEXA_SETTINGS -GE:tismin=300:tismax=500 >& log_assembly.txt -DI:lrt got renamed to -DI:trt. One of the few incompatibilities in command line parsing I had to introduce lately, sorry for that. B.