[mira_talk] Re: Mira and NFS mount
- From: Iddo Friedberg <idoerg@xxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Tue, 9 Aug 2011 17:12:01 -0400
Thanks.
Now it seems that another problem came up:
Name too long: HWUSI-EAS687_112864999:8:3:9753:12271#CCGTCC/2
What is the character limit on read names?
Thanks,
./I
On Tue, Aug 9, 2011 at 4:35 PM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote:
> **
>
> On Tuesday 09 August 2011 21:38:12 Iddo Friedberg wrote:
>
> > Thanks Bastien.
>
> >
>
> > Anyhow, it seems like I may have found a cluster with some local
> diskspace,
>
> > so I can redirect the log directory locally. Also installed 3.4rc4. The
>
> > only trouble is, that now I an getting the following:
>
> >
>
> > mira --project=CCGTCC COMMON_SETTINGS
>
> > -DI:lrt=/localscratch/friedbi/mira_logs
> --job=denovo,genome,accurate,solexa
>
> > SOLEXA_SETTINGS -GE:tismin=300:tismax=500 >& log_assembly.txt
>
>
>
> -DI:lrt got renamed to -DI:trt.
>
>
> One of the few incompatibilities in command line parsing I had to introduce
> lately, sorry for that.
>
>
> B.
>
>
>
--
Iddo Friedberg
http://iddo-friedberg.net/contact.html
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