On Thu, Mar 18, 2010 at 7:05 PM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote: > > MIRA will guess right most of the time which format it sees. But you can force > it to use a given offset with -LR:fqqo Does it care about PHRED (min zero) versus the old Solexa scores (which went down to -5)? Peter -- You have received this mail because you are subscribed to the mira_talk mailing list. For information on how to subscribe or unsubscribe, please visit http://www.chevreux.org/mira_mailinglists.html