[mira_talk] Re: Mapping segmentation fault v3.9.5

  • From: "Jackie Lighten" <jackie.lighten@xxxxxx>
  • To: <mira_talk@xxxxxxxxxxxxx>
  • Date: Thu, 1 Nov 2012 18:20:34 -0300

Yes. The same error occurred using 1 thread, as well as 4.

If you send me a personal email to jc807177@xxxxxx I will email you a link
to a drop box folder where you can access the data.

 

J

 

From: mira_talk-bounce@xxxxxxxxxxxxx [mailto:mira_talk-bounce@xxxxxxxxxxxxx]
On Behalf Of Bastien Chevreux
Sent: October-31-12 3:45 PM
To: mira_talk@xxxxxxxxxxxxx
Subject: [mira_talk] Re: Mapping segmentation fault v3.9.5

 

On Oct 31, 2012, at 19:33 , "Jackie Lighten" <jackie.lighten@xxxxxx> wrote:

I get a core dump when Mira attempts to write contigs (see below for
manifest file inputs and where the dump takes place)

I am running on a virtual machine that has over 20GB RAM and 4 threads
allocated.

Any idea how to remedy this?

 

This looks like a 3.9.5 log. Does it happen reproducibly, i.e., with
-GE:not=1

 

If yes, could I have the data set, please? (Though I would be able to work
on it only next week)

 

B.

 

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