[mira_talk] Re: Getting coverage by each technology per each contig
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Thu, 22 May 2014 00:19:05 +0200
On 21 May 2014, at 21:07 , Martin MOKREJŠ <mmokrejs@xxxxxxxxx> wrote:
> […]
> Would *_contigstats.txt contain one more column with the sequencing
> technology abbreviated, things
> would have been even easier.
I know. But then again some people would want to have it not by sequencing
tech, but by readgroup … and the format of the contigstats would start to
become fluid instead of fixed. Not good.
On the other hand: for things like this one should really parse the MAF file.
It’s practically developed for easy processing :-)
B.
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