Okays, but do you think that the assembly created via MIRA at the first go , must need a post mapping process with gap4 database or it can be overlooked. On what condition can that be overlooked, if you can mention. Kind Regards, Sharmistha On Thu, Dec 3, 2009 at 1:57 AM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote: > On Mittwoch 02 Dezember 2009 Sharmista Saha wrote: > > The log file says there are errors in mapping, say 2, 3, 4, but assembly > > process is completed. > > I do have the caf file as an output. > > Perfect. With that you can create about any other output you need: > - with caf2gap (Sanger Centre): a gap4 database > - with convert_project (MIRA package): ACE, TEXT, HTML, MAF etc.pp > > Regards, > Bastien > > -- > You have received this mail because you are subscribed to the mira_talk > mailing list. For information on how to subscribe or unsubscribe, please > visit http://www.chevreux.org/mira_mailinglists.html > -- Sharmistha Saha,