Dear friends: would appreciate help for the following query from Ms.
Udya Abhraham .
Thanks, Srinivasan.
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Dear Sir,
I am Ms Udaya Abraham doing final year Msc Bioinformatics in Stella
Maris College. Currently, i am doing a project related to construction
of phylogenetic tree.
I have successfully installed bioperl in linux and i also did couple
of programs .But when i did a particular program for retrieving
sequence from swissprot database, by giving the corresponding
accession number in my program(given below), its showing an error
saying cannot connect to database.
use Bio::Perl;
$seq_object = get_sequence ('swiss',"LCN10_HUMAN");
write_sequence (">lcn10.fasta",'fasta',$seq_object);
Iam not sure whether i have installed it in the correct manner or else
i would not have got this error , controrary, i was able to do couple
of programs. kindly help.
regards
udaya
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