[rmaexpress_help] Re: getting RMAexpress to recognize cdf files
- From: Ben Bolstad <bolstad@xxxxxxxxxxxxxxxxx>
- To: rmaexpress_help@xxxxxxxxxxxxx
- Date: Tue, 10 May 2005 16:34:48 -0700
RMAExpress needs uses neither Java nor MDAC so I am not sure why you
report that. In addition, I am not sure why you report ".RMA" files as I
do not know of anything related to RMAExpress with that file extensions.
Perhaps you mean ".RME" files?
All that said, in general unless you are trying to do something extra
special, you should be able to read in your raw CDF file and raw CEL
files directly into RMAExpress (without using the converter program at
all). You would do this by using the "Read Unprocessed Files" option
from the file menu.
Hope this helps.
Ben
On Tue, 2005-05-10 at 17:09 -0400, Peterson, John wrote:
> Dr. Bolstad,
>
>
> I have downloaded and installed RMAexpress, I am using Windows XP so I
> have downloaded JAVA 1.5 and MDAC 2.7, and I have downloaded the cdf
> files for the Affy chips I use. I have tried to use converted files
> (.RMA), but I get the error message that the files contain no cdf info.
> However, when I try to point RMAconversion to the cdf files nothing
> shows up. Thanks for any advice you can offer.
>
>
>
> John
>
>
>
> John W Peterson, Ph.D.
>
> The Lerner Research Institute,
>
> Dept. of Neurosciences, NC30
>
> The Cleveland Clinic Foundation
>
> 9500 Euclid Avenue
>
> Cleveland, Ohio 44195
>
>
>
> Phone: (216) 444-8712
>
> Fax: (216) 444-7927
>
>
>
>
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--
Ben Bolstad <bolstad@xxxxxxxxxxxxxxxxx>
http://www.stat.berkeley.edu/~bolstad
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