Hi,
I added a flag -lrt to the line you suggested in config/MakeDefs.linux, used
'perl configure opt useHDF5' and make seemed to proceed fine. However, when I
ran check.p, one test was failed. The output for the error is listed below.
I would appreciate any suggestions you may have to fix the problem.
RC
Running: /home/rc/Overture.v22/bin/mbuilder noplot nopause abortOnEnd
asmoBody.cmd > gridsFromCad.out...
HDF5-DIAG: Error detected in HDF5 library version: 1.6.5 thread 46912576602832.
Back trace follows.
#000: H5F.c line 1326 in H5Fis_hdf5(): unable to open file
major(05): Low-level I/O layer
minor(29): Unable to initialize object
#001: H5FD.c line 1044 in H5FD_open(): open failed
major(22): Virtual File Layer
minor(29): Unable to initialize object
#002: H5FDsec2.c line 366 in H5FD_sec2_open(): unable to open file
major(04): File interface
minor(17): Unable to open file
#003: H5FDsec2.c line 366 in H5FD_sec2_open(): No such file or directory
major(03): Internal HDF5 error
minor(87): System error message
HDF5-DIAG: Error detected in HDF5 library version: 1.6.5 thread 46912576602832.
Back trace follows.
#000: H5F.c line 2048 in H5Fopen(): unable to open file
major(04): File interface
minor(17): Unable to open file
#001: H5F.c line 1725 in H5F_open(): unable to open file
major(04): File interface
minor(17): Unable to open file
#002: H5FD.c line 1044 in H5FD_open(): open failed
major(22): Virtual File Layer
minor(29): Unable to initialize object
#003: H5FDsec2.c line 366 in H5FD_sec2_open(): unable to open file
major(04): File interface
minor(17): Unable to open file
#004: H5FDsec2.c line 366 in H5FD_sec2_open(): No such file or directory
major(03): Internal HDF5 error
minor(87): System error message
sh: line 1: 11674 Aborted /home/rc/Overture.v22/bin/mbuilder
noplot nopause abortOnEnd asmoBody.cmd >gridsFromCad.out
ERROR running /home/rc/Overture.v22/bin/mbuilder noplot nopause abortOnEnd
asmoBody.cmd > gridsFromCad.out. Check the logfile gridsFromCad.out
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
ERROR return rt=256
An ERROR occured for the test=grids from cad
You may want to check the appropriate log file=.
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Hi RC,
I think that you can change the following line that appears in
Overture/config/MakeDefs.linux
#pgf77 FORTRAN_LIBS = $(OV_RPATH)$(PGI_LIB) -L$(PGI_LIB) -lpgftnrtl -lpgmp
-lpgc -lstd
to include the extra library. Type "configure" after making this change.
...Bill
R C wrote:
Hi, I am trying to install Overture2.2 on an AMD 64 system using pgf77
v7.1-3, and
I get the error listed below.
Portland group support suggests using the flag -pgf77libs. Is there a way
to
specify this in calling configure?
Thanks.
RC
/opt/pgi/linux86-64/7.1/lib/libpgftnrtl.a(async.o): In function `asy_wait':
async.c:(.text+0x32): undefined reference to `aio_suspend'
async.c:(.text+0x64): undefined reference to `aio_return'
async.c:(.text+0x8d): undefined reference to `aio_error'
/opt/pgi/linux86-64/7.1/lib/libpgftnrtl.a(async.o): In function
`Fio_asy_read':
async.c:(.text+0x2a0): undefined reference to `aio_read'
/opt/pgi/linux86-64/7.1/lib/libpgftnrtl.a(async.o): In function
`Fio_asy_write':
async.c:(.text+0x352): undefined reference to `aio_write'
collect2: ld returned 1 exit status
make[1]: *** [plotStuff] Error 1
