[mira_talk] Re: fosmid assembly using mira

  • From: Bastien Chevreux <bach@xxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Wed, 23 Dec 2009 11:39:48 +0100

On Mittwoch 23 Dezember 2009 Bastien Chevreux wrote:
> Does the section "Extracting paired-end data from SFF" of the new 454 usage
> manual (http://mira-assembler.sourceforge.net/docs/mira_454.html) help?

Vacations! I need vacations. Forget what I wrote, that won't help you a bit. 
In fact, I changed usage of SSAHA to SSAHA2 just lately, and the docs for that 
haven't made it online yet.

But they're in the latest builds:

  http://www.chevreux.org/tmp/mira_3rc4e_dev_linux-gnu_x86_64_static.tar.bz2
  http://www.chevreux.org/tmp/mira_3rc4e_dev_linux-gnu_i686_32_static.tar.bz2
  http://www.chevreux.org/tmp/mira-3rc4e.tar.bz2
  http://www.chevreux.org/tmp/mira_3rdparty_21-12-2009.tar.bz2

Look in the "usage" manual for the section "Using SSAHA2 to screen for vector 
sequence"

B.

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