[mira_talk] Re: eukaryotic cDNA: assembler parameterization pipeline

hi alexie,

Alexie Papanicolaou wrote:
> I've written a short pipeline for parameterization of MIRA for cDNA data.
> 
> Essentially, it launches MIRA and Newbler with an array of parameters
> (from a simple config file) and saves the user from defining many times.
> Once they finish the script conducts a BLASTX approach to identity
> contig quality. It's all pretty automated so i when i come to work in
> the morning my run has finished :-)

it looks useful. can you, please, point me where to download it?

thanks,

jan


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