[mira_talk] Re: Using 2 file sets as input

Hi Jan,
So far as I know, it is only possible to input on set of data per data type. Just fix the xml file by removing the last line of the first file (</trace_volume>), and the first two of the second (<?xml version...><trace_volume>). 

HTH,

Lionel

On 4 Jun 2009, at 9:57 , Jan van Haarst wrote:


Hi all,

Is it possible to have multiple file sets (fasta, qual & xml) in a
single assembly ?
The reason I need this, is that something went wrong with an
experiment, and thus half of the reads from a sff file contain a
primer at the start of the read and half doesn't.
I have already split the sff file in two, and used sff_extract to
generate two sets of files from the two sff files, so I now have two
sets of files that are both without primer.

I tried simple concatenation, but as you would expect, the XML parser
doesn't like it :-)
So, is it possible to add 2 sets to mira, or should I just fix the XML ? 
--
Dag,
Jan



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