[mira_talk] Re: Short notice: test version 2.9.44x2
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Sun, 19 Apr 2009 11:58:27 +0200
On Saturday 18 April 2009 Sucheta Tripathy wrote:
> I would be interested in testing this beta version. Only thing I would like
> to know is how much memory I will be needing for a genome of size approx.
> 100 MB. I have a limitation with the memory usage.
I forgot to write: in case you run into megahubs, please first try ignoring
them (set -SK:mmhr high enough) instead of masking (-SK:mnr). This should, in
theory, still give a better assembly, albeit I'm not sure how much longer the
assembly would take (hopefully not much).
Regards,
Bastien
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