[mira_talk] Re: HAF tag recovery
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Sat, 23 Nov 2013 15:09:55 +0100
On 22 Nov 2013, at 11:41 , Remi Moulinas <remi.moulinas@xxxxxxxxxxxxx> wrote:
> I am trying to recover the full list of HAF tags in order to perform
> news assemblies with only HAF2 or HAF3 by example. With readpool.maf I
> have trouble to get the names of the reads associated with the HAF tag.
That is actually very easy: the tags all belong to the read which they are in,
i.e., the line starting with RD. A simple script in any language will extract
that for you.
B.
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