[mira_talk] Re: Solid CSFASTA
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Fri, 9 Sep 2011 09:34:54 +0200
On Friday 09 September 2011 07:40:04 000.calabi.yau.000@xxxxxxxxxxxxxx wrote:
> have you tried error correcting the data using:
>
> SOLiD™ Accuracy Enhancement Tool =>
> http://solidsoftwaretools.com/gf/project/saet/
>
> It is often recommended on the ABySS assembler mailing list for SOLiD data
> prior to assembly. => http://www.bcgsc.ca/platform/bioinfo/software/abyss
> I haven't used SOLiD data before, but maybe this helps you. Maybe ABySS is
> also an alternative to Velvet in your case...
Now that's something potentially extremely useful and I can understand why it
is recommended. Actually that's the tool that might change my position on
supporting SOLiD ... has anyone here experience with the usefulness of it?
B.
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