I'm doing a solexa mapping assembly of paired end reads and the new data building onto my backbone contigs is labeled in one of the following 2 formats: - "_cer_sxa_214" - "ILLUMINA-2F52BD_0038:8:4:18110:7690#0/2" And because its paired end data I can't very well do scaffolding with the "_cer_sxa_214" data so how can I ensure that all my reads retain their original names of "ILLUMINA-....." Thanks, Evan