I guess it is not enough to feed MIRA with MinION reads as pacbio. Running
nanopolish before denovo decrease the error rate:
http://biorxiv.org/content/early/2015/03/11/015552
I have tried this pipeline and it is promising. (However I did not change
Celera assembler to MIRA).
Tibor
On Wed, Jun 10, 2015 at 8:45 PM, Adrian Pelin <apelin20@xxxxxxxxx> wrote:
I was wondering if there are any plans to implement this sequencing
technology into MIRA?
My guess is to just try it as pacbio? I should be getting one of these
machines soon and am curious to try MIRA as an assembler.
Adrian
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