On Thursday 10 March 2011 00:45:22 Stephanie Pearl wrote: > I'm trying to run an assembly (EST, denovo, 454) on two strains and am > experiencing some problems. I've merged my read, quality, and xml files Um ... yes, "merged" when speaking of XML is always a bit problematic. Did you do it by hand (I fear) or did you use sff_extract with "-a" to do that. B. -- You have received this mail because you are subscribed to the mira_talk mailing list. For information on how to subscribe or unsubscribe, please visit http://www.chevreux.org/mira_mailinglists.html