[mira_talk] Re: GAGE
- From: John Nash <john.he.nash@xxxxxxxxx>
- To: "mira_talk@xxxxxxxxxxxxx" <mira_talk@xxxxxxxxxxxxx>
- Date: Fri, 30 Mar 2012 18:43:42 -0400
On 2012-03-30, at 6:03 PM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote:
> I would not recommend to anyone to try and assemble human or bee Illumina
> data with MIRA. It simply is not built for that amount of data.
Tell me about it. I assembled a 100 megabase genome using 40 cores of a
computer with 1 TB RAM. I used 80 fold illumina and (ugh) 15 fold 454 coverage.
It took six weeks.
John
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