Might be of interest.
For YETI
Debabrata Phukon
---------- Forwarded message ---------
From: Mohan Patel <monapatelpgatti@xxxxxxxxx>
Date: Fri, Jul 10, 2020, 7:52 AM
Subject: Re: JRF positions
To: YETI <meet.yeti@xxxxxxxxx>
Dear YETI,
Please circulate this advertisement.
Thanking you,
Mohan
*PhD/JRF positions available at TDU, Bengaluru-64*
*The University of Trans-Disciplinary Health Sciences and Technology (TDU)
Position: JRF (1 No.) and Forestry college, Sirsi, UAS, Dharwad (JRF 1
No.) and IWST (1)*
We are looking for dedicated candidates who are interested in registering
PhD positions at TDU.
For more details about the research activities, see this link :
https://mohanmultiomics.wordpress.com/
*Requirement: immediately *
*Project on “Genomics and population genetics of forest trees”*
*1.JRF/PhD position at TDU (1) under Dr. Mohana Kuamra P and one under Dr.
Prabudha IWST, Bangalore *
*Duration: *2 years *Fellowship: *As per Gov. norms, Rs. 31,000/- per
month + HRA
*Eligibility:*M.Sc/M.Tech in Bioinformatics, Molecular biology or any area
of Life Science with good academic standing with desirable experience.
Candidates should have qualified with *NET and Gate *
*Desirable Qualification: *Research interests/experience in molecular
biology, biotechnology, bioinformatics and basic knowledge in plant Biology
is essential.
*Job requirements: *
· Field collection of samples from Eastern Ghats and Western Ghats
· DNA and RNA isolation of different populations of collected
· Genomic and transcritptome sequencing. SSR SNP and EST analysis
· insilico analysis of polymorphic markers, Genotyping and metabolic
pathways analysis
· Candidate should work between the labs of IWST and TDU
· Establishing the Bioinformatic lab and analysis
· Report/book/manuscript writing
*The candidates are expected to have the following **experience*
- Experience in molecular biology techniques and in field biology work.
- Experience in Next generation sequencing analysis of DNA and RNA-seq
data
- Ability to analyse raw primary data generated by Illumina next
generation sequencing platform and create troubleshoot custom analysis
pipelines.
- Primer design and restriction mapping, Ability to handle all
downstream secondary and tertiary data analysis using commercially
available as well as open source software
- Apart from these, the applicant should have knowledge of the
following: scripting language: R, perl and/or Python
- Operating system: Unix and Windows
- Exposure to NGS Analysis tools like: BWA, Bowtie, SAM tools, BEDTools,
Galaxy, Tophat Cufflinks, FastQC, Trimgalore, Trinity, RSEM,edgeR,
DESeq,understanding of Statistics using: Microsoft Excel and R
- Genome Browser: Ensemble, JBrowser, IGV
- Ability to use SNPs, repeats analysis and Population StudyAnalysis
Tools like: MIcroSAtellite Identification (MISA), VarScan, RepeatModeler,
RepeatMasker, Functional Annotation Tools: Trinotate, MAKER-P, Augustus,
Blast2GO, TargetP etc.
- Familiar with population genetic analysis tools: ARLEQUIN
<http://anthropologie.unige.ch/arlequin/>, POPGENE
<http://www.ualberta.ca/~fyeh/index.htm>, BOTTLENEC, DNASP
<http://www.ub.es/dnasp/>,FSTAT
<http://www.unil.ch/izea/softwares/fstat.html>, LAMARC
<http://evolution.genetics.washington.edu/lamarc.html>,STRUCTURE
<http://pritch.bsd.uchicago.edu/software.html>etc and Phylogenetic
analysis:MEGA <http://www.megasoftware.net/>, PHYLIP, PAUP* 4.0
<http://paup.csit.fsu.edu/>CLUSTAL
<http://www.csc.fi/molbio/progs/clustalw/>etc
2. *Project title: Development of sustainable technology for the
production of anticancer chromone alkaloids, rohitukine and dysoline from
Indian forest trees" *
*Duration: *2 years *Fellowship: *As per DBT norms, Rs. 31,000/- per month
+ HRA, Extendable to 3rdyear
*Eligibility:M. Sc in life sciences with NET and Gate qualifications*
*1.JRF/PhD one position at Forestry college, Sirsi , Co-PI: Dr. Jagadesh
(1)*
*Job requirements/**Skills sets required *
· Field collection of samples from Western Ghats
· Field work and Cultivation of plant species in agro-forestry mode.
· Molecular and biochemical techniques
· Botany and molecular phylogeny
· Isolation and purification metabolites
· GIS and Niche modelling
· Data mining
· Selected candidate should work between the labs of TDU and Forest
college, Sirsi
· Report/book/manuscript writing
*To apply: *Interested candidates may submit their detailed CV before July
31,2020 with the subject line, “JRF/PhD for DBT-rohitukine project” to the
Principal Project coordinator/ Investigator, Dr. Mohana Kumara P, Assistant
Professor, TDU, Bengaluru, *mohan.kumar@xxxxxxxxxx*
--
*Dr. Mohana Kumara P*
*Assistant Professor*
Centre for Ayurveda Biology and Holistic Nutrition (CABHN) at TDU:
http://tdu.edu.in/home/cab/ ;<http://www.tdu.edu.in/genomics>
https://mohanmultiomics.wordpress.com/
*The *
*University of Trans-Disciplinary Health Sciences and Technology (TDU)*
tdu.edu.in <http://www.tdu.edu.in/> Ph; +91-80-28568000, Extn;153/144;
+91-80-28568878
Phone:91-9790464058;91-8124045644
