[mira_talk] Re: RE reading fasta files
- From: Jan Paces <hpaces@xxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Fri, 03 Apr 2009 09:08:56 +0200
Bastien Chevreux wrote:
> So, at the moment, I settled for "if there are no qualities, the user has to
> know what he's doing and sets flags accordingly.
>
> I'd be happy to hear suggestions for a better handling though. I personally
> am
> a big fan of "if it does not meet the expectations of the program, fail".
Well, I think that it is ok the way it is Just, it was not easy to find
those two parameters and how thay are connected. My way of thinking was:
if mira first accepts fasta reads without qualities, it make no sense to
clip all of it away later. But I see your point.
Maybe one paragraph in tutorial, how to add already known sequences from
genbank? I think it is common task.
Thanks,
Jan
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