[mira_talk] Re: RE reading fasta files

Bastien Chevreux wrote:
> So, at the moment, I settled for "if there are no qualities, the user has to 
> know what he's doing and sets flags accordingly.
> 
> I'd be happy to hear suggestions for a better handling though. I personally 
> am 
> a big fan of "if it does not meet the expectations of the program, fail".

Well, I think that it is ok the way it is Just, it was not easy to find
those two parameters and how thay are connected. My way of thinking was:
if mira first accepts fasta reads without qualities, it make no sense to
clip all of it away later. But I see your point.

Maybe one paragraph in tutorial, how to add already known sequences from
genbank? I think it is common task.

Thanks,

Jan

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