[mira_talk] How to generate SNP list?
- From: Jackie Lighten <jc807177@xxxxxx>
- To: "mira_talk@xxxxxxxxxxxxx" <mira_talk@xxxxxxxxxxxxx>
- Date: Mon, 25 Apr 2011 09:09:38 -0300
Hi Guys,
Can someone tell me if I can generate a table of my SNPs between my two
strains, and the frequency at which they occur.
Using miraSearchESTSNPs, my info_snplist.txt is empty!
Also, my step 2 results distributed between produced three folders
³defaut_assembly², ³remain_assembly² and ³strain1_assembly². It seems to
have converted my ³strain 2² to ³default² or ³remain². Is this normal?
Cheers,
J
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