[mira_talk] Re: Hash frequency specification (precomputation)

  • From: Bastien Chevreux <bach@xxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Mon, 24 Oct 2011 00:13:39 +0200

On Oct 23, 2011, at 22:44 , Robert Bruccoleri wrote:
> Is this clear?

Crystal.

The answer is still no, sorry. While in theory one could think of a mechanism 
to let MIRA use - under some circumstances - substitute files for the hash 
statistics (which you would need to generate as well, and it's not only k-mer 
frequencies in there but also positioning and a couple of other things), I fear 
that the changes to the code are non trivial to implement / integrate. And at 
the moment I have so many other burning areas that I won't have any time to 
spend on this kind of problem, sorry again.

B.
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