[mira_talk] Re: EST SNP
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Fri, 16 Oct 2009 19:57:22 +0200
On Mittwoch 30 September 2009 Bastien Chevreux wrote:
> > Another possible enhancement that could be done is the ability to analyze
> > more than 8 strains at a time. In my case I have 7 strains and the
> > "remain" strain. So, with this pipeline it is not possible to use more
> > than 8 strains simultaneously.
> I don't remember exactly why I capped the number of strain in MIRA to 8 ...
> I think some data structure had only 3 bits remaining and could not imagine
> that people would like to assemble more than 4 or 5 strains.
Hello Miguel,
it turned out that the "capping" to 8 strains does not apply for de-novo
sequencing and the error message was just activated by a bug.
http://www.chevreux.org/tmp/mira_3rc4a_dev_linux-gnu_x86_64_static.tar.bz2
fixes that.
Regards,
Bastien
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