On 17 Feb 2014, at 20:26 , Chayan Roy <chayan.roy93@xxxxxxxxx> wrote: > […] > now i am not sure how to a single file for a PE assembly with MIRA.. If the read names adhere to standard Solexa/Illumina naming scheme, MIRA will recognise the pairs automatically. > ... in both cases MIRA is complaining...little confuse..any one has any > experiences with this??? Being a teeny tiny *little* bit more specific about the messages you get might give enough information on what goes wrong :-) B. -- You have received this mail because you are subscribed to the mira_talk mailing list. For information on how to subscribe or unsubscribe, please visit http://www.chevreux.org/mira_mailinglists.html