[mira_talk] Re: Assembly using Illumina Paired-end reads from SRA

  • From: Bastien Chevreux <bach@xxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Tue, 18 Feb 2014 00:21:30 +0100

On 17 Feb 2014, at 20:26 , Chayan Roy <chayan.roy93@xxxxxxxxx> wrote:
> […]
> now i am not sure how to a single file for a PE assembly with MIRA..

If the read names adhere to standard Solexa/Illumina naming scheme, MIRA will 
recognise the pairs automatically.

> ... in both cases MIRA is complaining...little confuse..any one has any 
> experiences with this???

Being a teeny tiny *little* bit more specific about the messages you get might 
give enough information on what goes wrong :-)

B.



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