[mira_talk] After Scaffolding
- From: "Giuseppe D'Auria" <giuseppe.dauria@xxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Thu, 03 Sep 2009 08:16:12 +0200
Dear all,
Now that Bambus is working and I obtained the outfiles with the order of
contigs, there is a way to order and orient automatically my contigs in
the .caf file in order to open my GAP4 and see the genome in a
fashionable ordered and oriented way?
I am think to something like
myproject.caf --> myproject_ordered.caf --> caf2gap -->Gap4
Thank you in advance
Giuseppe
--
Dr. Giuseppe D'Auria
Cavanilles Institute for
Biodiversity and Evolutionary Biology
University of Valencia
"Poligono de la Coma" s/n
46980 Paterna (Valencia),Spain
web: http://www.uv.es/cavanilles/genevol/
tel: +34 9635 43270
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