[mira_talk] cleaning reads
- From: Jose Blanca <jblanca@xxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Thu, 05 May 2011 08:59:59 +0200
Hi:
We've developed a new software called clean_reads and a MIRA user has
send us a mail asking for the better way to go from sff_extract to MIRA
passing through clean_reads. He was using the xml file created by
sff_extract, but clean_reads does not handle that file at all. I've said
to him that if he uses the clipping option in sff_extract (-c) he
wouldn't need to use the xml file at all. Is this correct? Would MIRA
need any additional functionality in clean_reads to work ok?
The clean_reads page is:
http://bioinf.comav.upv.es/clean_reads/
Best regards,
--
Jose M. Blanca Postigo
Instituto Universitario de Conservacion y
Mejora de la Agrodiversidad Valenciana (COMAV)
Universidad Politecnica de Valencia (UPV)
Edificio CPI (Ciudad Politecnica de la Innovacion), 8E
46022 Valencia (SPAIN)
Tlf.:+34-96-3877000 (ext 88473)
--
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