Hi Cristina,
From past discussions on this mailing list I recall that if you are running
multi-threaded, then MIRA's results are not always reproducible. They would
usually be similar though.
Running single-threaded ought to be more reproducible - Bastien would know
if there are also random effects here as well.
Peter
On Thu, Dec 17, 2015 at 11:58 AM, CRISTINA FRIAS LOPEZ <
cristinafriaslopez@xxxxxx> wrote:
Hi,
I have a doubt about the method to select the seed.
I repeated an assembly with the same data and the same parameters and I
got a slightly different
assembly.
Does anybody known if MIRA uses any random function (like rand() or
srand() ) to fix the seed to start the kmer overlap between reads?
Thanks in advance,
Cristina
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