I'm having trouble figuring out the manifest syntax for a simple task so I'd figured I'd just better ask. My read length names are too long so when I run MIRA I get the suggestion to use "-MI:cmrnl=no". I'm using 3.9x so I know this syntax is out of date. The manual suggests using "-NW:mrnl=0" but I cannot figure out how to convert this into a line in the manifest file that MIRA will accept. Anyone know the proper syntax for ignoring read name length? Thanks, David