[mira_talk] Re: Preprocess memory requirement

  • From: Torben Nielsen <torben@xxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Wed, 1 Apr 2015 22:58:39 -1000

Andrej,

I have a lot of Illumina datasets, often with varying properties in terms of
quality, adapter content etc. and was thinking to use MIRA as default
preprocessing

That’s what I’d like to do. Even on datasets were I cannot realistically run
MIRA and expect results in finite time. Or memory.

I’m about to fire off 400 or so preprocessing runs on a cluster and I’m not
sure whether to go for the large memory nodes (>128 GB) or not.

Thanks, Torben
--
You have received this mail because you are subscribed to the mira_talk mailing
list. For information on how to subscribe or unsubscribe, please visit
http://www.chevreux.org/mira_mailinglists.html

Other related posts: