> On November 14, 2013 at 12:22 PM Peter Cock <p.j.a.cock@xxxxxxxxxxxxxx> wrote: > I presume from the discussion here > http://sourceforge.net/p/mira-assembler/tickets/6/?limit=25 > that "Failure, wrapped MIRA process aborted." is just a way of > the operating system (or in this case maybe SGE) killing MIRA? Probably. The only way to know for sure is when having stderr also redirected to a file (or even the same file) as stdout, because the OS normally gives a short on-line reason there. Of course one is SOL if stderr was not redirected because I have no idea if it is possible to check by return code whether the killing was done by the OS or not. B. PS: just out of curiosity, could you send me the complete log of the failed run and one of its siblings which succeeded? I'd like to see whether I can find some heuristics which warn the user early.