> On November 6, 2013 at 2:40 PM Remi Moulinas <remi.moulinas@xxxxxxxxxxxxx> > wrote: > I had a bug using Mira 4.0rc1 on a mapping assembly with ion torrent dataset : > My reference was human chromosome 17 (81Mb) Not sure whether the problem you see is a bug in MIRA or rather a bug in the GFF file of the reference sequence. Can you please send me the manifest and all data files necessary for the reference readgroup? B.