[overture] error in running examples

  • From: "Neeraj Jain" <neerajjain77@xxxxxxxxx>
  • To: overture@xxxxxxxxxxxxx
  • Date: Fri, 8 Aug 2008 14:45:13 -0400

Hi,

I attempted to install OVERTURE on CentOS linux following the instruction on
Overture website. I installed following.

HDF5-1.6.5
Mesa-7.0.3
openMotif-2.2.1
Overture.v22
f2c

Every thing seems to be installed fine. But when I run "check.p", the test
of sampleGrids is successful  but other tests give errors. I am pasting
below the error part of the output from running "check.p". Could you please
help in fixing the error?

>>>make sampleGrids successful!

************************************************************************************************
   *** Test: grids from cad : build grids from CAD geometries (in the
sampleGrids directory)    ***

************************************************************************************************
>>>cd
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/sampleGrids...
Run
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/sampleGrids/gridsFromCad.p

================================================================================
This perl script will build some grids from CAD
It will check to see if the grids seem to be correctly generated.
  Usage:
    gridsFromCad.p [options]
 Options
   no options yet
==============================================================================

*** precision=double
Using the grid generator
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/bin/ogen
Using rap version:
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/bin/rap
Using mbuilder version:
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/bin/mbuilder
Running:
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/bin/rap
noplot nopause abortOnEnd asmoNoWheels.cmd > gridsFromCad.out...
...success
Running:
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/bin/mbuilder
noplot nopause abortOnEnd asmoBody.cmd > gridsFromCad.out...
HDF5-DIAG: Error detected in HDF5 library version: 1.6.5 thread 0.  Back
trace follows.
  #000: H5F.c line 1326 in H5Fis_hdf5(): unable to open file
    major(05): Low-level I/O layer
    minor(29): Unable to initialize object
  #001: H5FD.c line 1044 in H5FD_open(): open failed
    major(22): Virtual File Layer
    minor(29): Unable to initialize object
  #002: H5FDsec2.c line 366 in H5FD_sec2_open(): unable to open file
    major(04): File interface
    minor(17): Unable to open file
  #003: H5FDsec2.c line 366 in H5FD_sec2_open(): No such file or directory
    major(03): Internal HDF5 error
    minor(87): System error message
HDF5-DIAG: Error detected in HDF5 library version: 1.6.5 thread 0.  Back
trace follows.
  #000: H5F.c line 2048 in H5Fopen(): unable to open file
    major(04): File interface
    minor(17): Unable to open file
  #001: H5F.c line 1725 in H5F_open(): unable to open file
    major(04): File interface
    minor(17): Unable to open file
  #002: H5FD.c line 1044 in H5FD_open(): open failed
    major(22): Virtual File Layer
    minor(29): Unable to initialize object
  #003: H5FDsec2.c line 366 in H5FD_sec2_open(): unable to open file
    major(04): File interface
    minor(17): Unable to open file
  #004: H5FDsec2.c line 366 in H5FD_sec2_open(): No such file or directory
    major(03): Internal HDF5 error
    minor(87): System error message
sh: line 1:  8563 Aborted
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/bin/mbuilder
noplot nopause abortOnEnd asmoBody.cmd > gridsFromCad.out
ERROR running
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/bin/mbuilder
noplot nopause abortOnEnd asmoBody.cmd > gridsFromCad.out. Check the logfile
gridsFromCad.out
 
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
ERROR return rt=256

 An ERROR occured for the test=grids from cad
 You may want to check the appropriate log file=.
 
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

************************************************************************************************
   *** Test: test operators and grid functions (in the tests
directory)                         ***

************************************************************************************************
>>>cd
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/tests...
>>>run checkop.p

================================================================================
This perl script will run some regression tests on grid functions and
operators.

  Usage:
    checkop.p [<application>]  (or `perl checkop.p')
  Notes:
 Applications:

     tderivatives    : tests derivatives in the operators.
     tbcc            : tests boundary conditions for coefficient matrices.

     tbc             : tests explicit boundary
conditions.
     tcm3            : tests coefficient matrix solver on a CompositeGrid

==============================================================================

*** precision=double, parallel= ****
running tderivatives...
Running: ./tderivatives  > tderivatives.out
./tderivatives: error while loading shared libraries: libperl.so: cannot
open shared object file: No such file or directory
 ERROR running the test program! return code=32512
running tbcc...
Running: ./tbcc  > tbcc.out
./tbcc: error while loading shared libraries: libperl.so: cannot open shared
object file: No such file or directory
 ERROR running the test program! return code=32512
running tbc...
Running: ./tbc  > tbc.out
./tbc: error while loading shared libraries: libperl.so: cannot open shared
object file: No such file or directory
 ERROR running the test program! return code=32512
running tcm3...
Running: ./tcm3 -check > tcm3.out
./tcm3: error while loading shared libraries: libperl.so: cannot open shared
object file: No such file or directory
 ERROR running the test program! return code=32512
**************************************************
************ There were 4  ERRORS ****************
**************************************************
 
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
ERROR return rt=1024

 An ERROR occured for the test=gridFunctions
 You may want to check the appropriate log file=.
 
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

************************************************************************************************
   *** Run the rapsodi tests (CAD fixup etc.) (in the sampleMappings
directory)                 ***

************************************************************************************************
>>>cd
/dhruva/njain/SOFTWARES/OVERTURE/Overture/Overture/Overture.v22/sampleMappings...
>>>run the rap tests: check.p and heal.p

================================================================================
This perl script will run rap and create many different geometries
It will check to see if the geometry seem to be correctly generated.
  Usage:
    check.p [<geoName>] [noplot]
[check=<checkFileDirectory>][special=<dir>}  (or `perl check.p')
 <checkFileDirectory> = directory in which to look for the check files,
default=.
 <geoName> = the name of a single geometry to check. By default check all
geometries.
 noplot = do not plot results.
 special = location of special files that are not distributed.
==============================================================================

Using the geometry generator ../bin/rap
checking ship-5415...
      ...ship-5415 could be read in and displayed
checking ship-kcs...
      ...ship-kcs could be read in and displayed
checking ship-kvlcc...
      ...ship-kvlcc could be read in and displayed
checking ship-5-parts...
      ...ship-5-parts could be read in and displayed
checking asmo...
      ...asmo could be read in and displayed
==================================================
============ Test apparently successful ==========
==================================================
rap test check.p successful

================================================================================
This perl script will run rap and heal a few different geometries
It will check to see if the healing commands seem to work.
  Usage:
    heal.p [<geoName>] [noplot][check=<checkFileDirectory>][special=<dir>}
(or `perl heal.p')
 <checkFileDirectory> = directory in which to look for the check files,
default=.
 <geoName> = the name of a single geometry to check. By default check all
geometries.
 noplot = do not plot results.
 special = location of special files that are not distributed.
==============================================================================

Using the geometry generator ../bin/rap
checking ship-5415-fix...
      ...ship-5415-fix could be read in and healed
==================================================
============ Test apparently successful ==========
============ with 0 broken surfaces     ==========
==================================================
>>>rap tests successful!

************************************************************************************************
   ****************** Tests: passed = 2, failed=2
*****************************************

************************************************************************************************


Neeraj Jain

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