[mira_talk] Re: ppc64 - RHEL 5.4: mira 3.2.1 fails to compile
- From: George Marselis <George.MARSELIS@xxxxxxxxxxxx>
- To: "mira_talk@xxxxxxxxxxxxx" <mira_talk@xxxxxxxxxxxxx>
- Date: Tue, 10 May 2011 22:40:52 +0300
Bastien,
Yeah, it looks like RHEL (or just HEL) is extremely happy to mix 32-bit
and 64-bit libraries, and everything be damned.
I think I got a hold of it: I run configure and then edited the makefiles
by hand, removing any references to 32-bit libraries I could find. Would
you like to take a look at the mess after I am done? I could post a
tarball.
----
George Marselis, systems administrator
Building #2, Level 4, room 4327
Computational Bioscience Research Center, KAUST
Land: +966-2-808-2944, Mobile: +966-56-321-7713, Skype: project2501a
On 10/5/11 6:41 PM, "Bastien Chevreux" <bach@xxxxxxxxxxxx> wrote:
>Sounds as if parts where compiled in 32, others in 64 bit. Could you
>please look via "file"?
>
>B.
>
>----- original message --------
>
>Subject: [mira_talk] ppc64 - RHEL 5.4: mira 3.2.1 fails to compile
>Sent: Tue, 10 May 2011
>From: George Marselis<George.MARSELIS@xxxxxxxxxxxx>
>
>> Hey Bastien,
>>
>> I am trying to compile mira 3.2.1 on that "wonderful" machine which I
>>have
>> inherited.
>>
>> It fails with the following error:
>>
>> libtool: link: g++ -pthread -I/usr/include -DPUBLICQUIET -DAJ_Linux64
>> -I/usr/local/include -O3 -funroll-loops -pthread -I/usr/include -o
>> mira_101 mira_101.o -L/root/mira-3.2.1/src/io
>>-L/root/mira-3.2.1/src/util
>> -L/root/mira-3.2.1/src/errorhandling -L/root/mira-3.2.1/src/mira
>> -L/root/mira-3.2.1/src/examine -L/root/mira-3.2.1/src/EdIt
>> -L/root/mira-3.2.1/src/caf -L/root/mira-3.2.1/src/knn_abi373
>> -L/root/mira-3.2.1/src/knn_alf -L/usr/lib -L/usr/local/lib -lmira
>> -lmiraEdIt -lmiraExamine -lmirasupport -lmiraestass -lmiraerrorhandling
>> -lmirautil -lmiradptools -lmirafio -lmiracaf -lmiraKNN_abi373 -lm
>> /usr/lib/libexpat.so -lboost_thread -lboost_regex -lz -pthread
>> /usr/bin/ld: skipping incompatible /root/mira-3.2.1/src/mira/libmira.a
>> when searching for -lmira
>> /usr/bin/ld: cannot find -lmira
>> collect2: ld returned 1 exit status
>> make[2]: *** [mira_101] Error 1
>>
>> Gcc version: 4.1.2
>>
>> Any clues?
>>
>>
>>
>>
>>
>> ----
>> George Marselis, systems administrator
>> Building #2, Level 4, room 4327
>> Computational Bioscience Research Center, KAUST
>> Land: +966-2-808-2944, Mobile: +966-56-321-7713, Skype: project2501a
>>
>>
>>
>>
>>
>>
>> --
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>>
>
>--- original message end ----
>
>
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