[mira_talk] Re: 答复: [mira_talk] Re: GAGE
- From: Robert Bruccoleri <bruc@xxxxxxxxxxxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Fri, 30 Mar 2012 21:42:20 -0400
You can buy a one TB server from Dell. Check the R910 server. Likewise,
SGI sells the Altix UV which can go much higher in RAM.
--Bob
wangminixiao wrote:
> As I know, the latest version of mira do not support MPI calculation. Hence,
> I cannot imagine a computer with such big memory. Do you mean you are using
> a MPI version of mira? If so, could you please tell me how to get this
> version.
>
> --Original mail--
> From: mira_talk-bounce@xxxxxxxxxxxxx [mailto:mira_talk-bounce@xxxxxxxxxxxxx]
> 代表 John Nash
>
>
> On 2012-03-30, at 6:03 PM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote:
>
>
>> I would not recommend to anyone to try and assemble human or bee Illumina
>>
> data with MIRA. It simply is not built for that amount of data.
>
> Tell me about it. I assembled a 100 megabase genome using 40 cores of a
> computer with 1 TB RAM. I used 80 fold illumina and (ugh) 15 fold 454
> coverage. It took six weeks.
>
> John
>
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