[mira_talk] Re: mira runs with no errors, but no final result?

  • From: Bastien Chevreux <bach@xxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Thu, 10 May 2012 23:11:19 +0200

On May 10, 2012, at 16:21 , Bekim Cela wrote:
> I'm running a 454 assembly with MIRA on an IBM, and the process runs fine for 
> 12-22 hours or so. When it has finished, I see nothing in the results folder. 
> The log file lists no errors, but stops during assembly of one of the contigs 
> mid-process. Could this be because I am running out of memory on the 
> computer? (I have very limited space.)
> Let me know if theres anything else you need from me, so that you could help.

Normally MIRA catches out of memory errors and aborts with a corresponding 
message. If this does not happen, then the OS most probably killed MIRA. 
However, you should get a message somewhere stating this (something like 
"Killed" in the shell you started the process from, or use "dmesg").


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