Dear all, We are now using MIRA2.9 (mira_2.9.39_dev_linux-gnu_x86_64) for hybrid-assembling Sanger, 454, and solexa fragments with "-OUT:ort=yes" command option to obtain alignment file. However, the txt output shows only 21-base-length sequence from the 16th position for each alignment. How can we get a correct txt file from MIRA2.9? Or, is this a bug? Regards, Kenta Shirasawa -- You have received this mail because you are subscribed to the mira_talk mailing list. For information on how to subscribe or unsubscribe, please visit http://www.chevreux.org/mira_mailinglists.html