On Sep 29, 2011, at 20:39 , Peter Cock wrote: > That suggests you have FASTA sequences (are there > matching QUAL files with quality scores?). I have the bad feeling that there are no qualities. Visam, in that case you *do* want to read about assembly without qualities. B. -- You have received this mail because you are subscribed to the mira_talk mailing list. For information on how to subscribe or unsubscribe, please visit http://www.chevreux.org/mira_mailinglists.html