[mira_talk] Using MIRA to join contigs with 454 reads and/or map to Reference
- From: Rob Good <rtgood@xxxxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Thu, 7 Apr 2011 12:06:55 +1000
I've just used SOAPdenovo to generate an initial denovo assembly of a
Drosophila melanogaster paired end Illumina run.
This has generated 60,000 contigs from 32 to 40000 bp.
Can I :
1. Use MIRA to map these to a reference assembly
2. Use MIRA to joins these contains together with some 454 reads
Cheers
Rob
Rob Good
Ph. +61 3 8344 2347
Mob. 0434058250
Genetics Dept
University of Melbourne
PARKVILLE, Australia
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